Table 3 Results of the pairwise analysis of linkage disequilibrium in parent and offspring generation of “Gottesgabe” and “Graeff”. GG_F1: “Gottesgabe” offspring generation, GG_P: “Gottesgabe” parent generation, Grae_F1: “Graeff” offspring generation, Grae_P: “Graeff” parent generation, S.E.: standard error, Switches: number of recombinations between the alleles of the two loci
From: Clonality in black locust (Robinia pseudoacacia L.) and implications for seed production
Pop | Locus 1 | Locus 2 | P-value | S.E | Switches |
|---|---|---|---|---|---|
GG_F1 | R05 | R06 | 0 | 0 | 8656 |
GG_F1 | R05 | R_106 | 0 | 0 | 15,565 |
GG_F1 | R06 | R_106 | 0 | 0 | 14,231 |
GG_F1 | R05 | R01B | 0 | 0 | 7949 |
GG_F1 | R06 | R01B | 0 | 0 | 7307 |
GG_F1 | R_106 | R01B | 0 | 0 | 17,297 |
GG_F1 | R05 | R08 | 0 | 0 | 6766 |
GG_F1 | R06 | R08 | 0 | 0 | 6266 |
GG_F1 | R_106 | R08 | 0 | 0 | 14,719 |
GG_F1 | R01B | R08 | 0 | 0 | 7953 |
GG_F1 | R05 | R16 | 0 | 0 | 6817 |
GG_F1 | R06 | R16 | 0 | 0 | 6433 |
GG_F1 | R_106 | R16 | 0 | 0 | 13,941 |
GG_F1 | R01B | R16 | 0 | 0 | 6668 |
GG_F1 | R08 | R16 | 0 | 0 | 5900 |
GG_F1 | R05 | R035 | 0 | 0 | 7882 |
GG_F1 | R06 | R035 | 0 | 0 | 6497 |
GG_F1 | R08 | R035 | 0 | 0 | 6326 |
GG_F1 | R16 | R035 | 0 | 0 | 6417 |
GG_F1 | R06 | R032 | 0 | 0 | 8444 |
GG_F1 | R_106 | R032 | 0 | 0 | 31,691 |
GG_F1 | R01B | R032 | 0 | 0 | 8418 |
GG_F1 | R08 | R032 | 0 | 0 | 8531 |
GG_F1 | R16 | R032 | 0 | 0 | 6546 |
GG_F1 | R05 | R02 | 0 | 0 | 6132 |
GG_F1 | R06 | R02 | 0 | 0 | 5894 |
GG_F1 | R_106 | R02 | 0 | 0 | 14,223 |
GG_F1 | R01B | R02 | 0 | 0 | 5992 |
GG_F1 | R08 | R02 | 0 | 0 | 5606 |
GG_F1 | R16 | R02 | 0 | 0 | 5106 |
GG_F1 | R035 | R02 | 0 | 0 | 5890 |
GG_F1 | R032 | R02 | 0 | 0 | 5865 |
GG_F1 | R05 | R109 | 0 | 0 | 10,944 |
GG_F1 | R06 | R109 | 0 | 0 | 9103 |
GG_F1 | R08 | R109 | 0 | 0 | 8726 |
GG_F1 | R16 | R109 | 0 | 0 | 8876 |
GG_F1 | R035 | R109 | 0 | 0 | 8996 |
GG_F1 | R032 | R109 | 0 | 0 | 9738 |
GG_F1 | R02 | R109 | 0 | 0 | 8207 |
GG_F1 | R05 | R200 | 0 | 0 | 6867 |
GG_F1 | R06 | R200 | 0 | 0 | 6351 |
GG_F1 | R_106 | R200 | 0 | 0 | 13,119 |
GG_F1 | R01B | R200 | 0 | 0 | 6564 |
GG_F1 | R08 | R200 | 0 | 0 | 6019 |
GG_F1 | R16 | R200 | 0 | 0 | 5736 |
GG_F1 | R035 | R200 | 0 | 0 | 6197 |
GG_F1 | R032 | R200 | 0 | 0 | 6161 |
GG_F1 | R02 | R200 | 0 | 0 | 5382 |
GG_F1 | R109 | R200 | 0 | 0 | 8797 |
GG_F1 | R05 | R206 | 0 | 0 | 13,105 |
GG_F1 | R06 | R206 | 0 | 0 | 11,669 |
GG_F1 | R_106 | R206 | 0 | 0 | 22,273 |
GG_F1 | R01B | R206 | 0 | 0 | 13,231 |
GG_F1 | R08 | R206 | 0 | 0 | 10,945 |
GG_F1 | R16 | R206 | 0 | 0 | 11,884 |
GG_F1 | R035 | R206 | 0 | 0 | 10,747 |
GG_F1 | R032 | R206 | 0 | 0 | 17,318 |
GG_F1 | R02 | R206 | 0 | 0 | 11,303 |
GG_F1 | R109 | R206 | 0 | 0 | 16,593 |
GG_F1 | R200 | R206 | 0 | 0 | 11,440 |
GG_F1 | R05 | R032 | 4E − 05 | 0 | 8431 |
GG_F1 | R035 | R032 | 0.0001 | 0 | 8147 |
GG_F1 | R01B | R109 | 0.0069 | 0 | 9304 |
GG_F1 | R_106 | R035 | 0.096 | 0.01 | 22,655 |
GG_F1 | R_106 | R109 | 0.2215 | 0.02 | 17,288 |
GG_F1 | R01B | R035 | 0.2391 | 0.03 | 13,988 |
GG_P | R06 | R032 | 0 | 0 | 4489 |
GG_P | R16 | R206 | 0.0077 | 0 | 2476 |
GG_P | R035 | R206 | 0.0125 | 0 | 5843 |
GG_P | R06 | R109 | 0.0152 | 0.01 | 4590 |
GG_P | R08 | R109 | 0.0243 | 0 | 9805 |
GG_P | R16 | R032 | 0.0321 | 0.01 | 2293 |
GG_P | R16 | R109 | 0.0401 | 0.01 | 3731 |
GG_P | R05 | R035 | 0.0405 | 0.01 | 2500 |
GG_P | R032 | R109 | 0.0427 | 0.01 | 5608 |
GG_P | R08 | R206 | 0.0535 | 0.01 | 8499 |
GG_P | R01B | R035 | 0.0537 | 0.01 | 3394 |
GG_P | R01B | R032 | 0.0549 | 0.01 | 2660 |
GG_P | R08 | R035 | 0.067 | 0.01 | 9746 |
GG_P | R035 | R02 | 0.1059 | 0.02 | 2655 |
GG_P | R109 | R200 | 0.1188 | 0.02 | 4926 |
GG_P | R_106 | R206 | 0.1321 | 0.01 | 13,496 |
GG_P | R05 | R206 | 0.1357 | 0.02 | 2118 |
GG_P | R06 | R01B | 0.1752 | 0.03 | 1921 |
GG_P | R16 | R200 | 0.1757 | 0.03 | 1818 |
GG_P | R035 | R200 | 0.1772 | 0.02 | 4303 |
GG_P | R16 | R035 | 0.1801 | 0.02 | 2924 |
GG_P | R_106 | R200 | 0.188 | 0.01 | 10,930 |
GG_P | R06 | R16 | 0.1945 | 0.03 | 1659 |
GG_P | R_106 | R01B | 0.2001 | 0.02 | 9473 |
GG_P | R08 | R02 | 0.2002 | 0.02 | 4308 |
GG_P | R08 | R032 | 0.2338 | 0.02 | 7477 |
GG_P | R16 | R02 | 0.2659 | 0.04 | 973 |
GG_P | R08 | R16 | 0.2685 | 0.02 | 4644 |
GG_P | R05 | R109 | 0.3038 | 0.03 | 3135 |
GG_P | R032 | R200 | 0.3316 | 0.03 | 4065 |
GG_P | R05 | R_106 | 0.3608 | 0.02 | 8070 |
GG_P | R032 | R206 | 0.3655 | 0.02 | 4542 |
GG_P | R01B | R109 | 0.3787 | 0.02 | 4076 |
GG_P | R02 | R200 | 0.3921 | 0.04 | 1578 |
GG_P | R109 | R206 | 0.4304 | 0.02 | 6308 |
GG_P | R_106 | R02 | 0.4324 | 0.02 | 8583 |
GG_P | R05 | R200 | 0.5084 | 0.04 | 1472 |
GG_P | R_106 | R032 | 0.5157 | 0.01 | 12,031 |
GG_P | R06 | R206 | 0.5181 | 0.03 | 3503 |
GG_P | R01B | R206 | 0.5471 | 0.03 | 2954 |
GG_P | R200 | R206 | 0.5603 | 0.03 | 3834 |
GG_P | R_106 | R035 | 0.5677 | 0.01 | 15,099 |
GG_P | R035 | R109 | 0.6039 | 0.02 | 7208 |
GG_P | R05 | R16 | 0.6142 | 0.04 | 928 |
GG_P | R06 | R200 | 0.6301 | 0.03 | 2654 |
GG_P | R06 | R_106 | 0.6473 | 0.02 | 10,443 |
GG_P | R_106 | R109 | 0.6475 | 0.01 | 14,591 |
GG_P | R_106 | R16 | 0.6514 | 0.02 | 8793 |
GG_P | R05 | R08 | 0.6522 | 0.03 | 3816 |
GG_P | R05 | R032 | 0.6934 | 0.03 | 2130 |
GG_P | R01B | R200 | 0.6994 | 0.03 | 2097 |
GG_P | R01B | R02 | 0.714 | 0.03 | 1182 |
GG_P | R06 | R035 | 0.7331 | 0.02 | 4052 |
GG_P | R02 | R109 | 0.7588 | 0.02 | 3454 |
GG_P | R01B | R08 | 0.7736 | 0.02 | 5324 |
GG_P | R06 | R08 | 0.8142 | 0.02 | 6087 |
GG_P | R05 | R06 | 0.8284 | 0.02 | 1491 |
GG_P | R06 | R02 | 0.8296 | 0.03 | 1573 |
GG_P | R_106 | R08 | 0.8383 | 0.01 | 19,283 |
GG_P | R05 | R01B | 0.8474 | 0.03 | 1073 |
GG_P | R01B | R16 | 0.8519 | 0.03 | 1339 |
GG_P | R035 | R032 | 0.9245 | 0.01 | 5129 |
GG_P | R032 | R02 | 0.9412 | 0.01 | 2367 |
GG_P | R08 | R200 | 0.9527 | 0.01 | 6273 |
GG_P | R02 | R206 | 0.9558 | 0.01 | 2386 |
GG_P | R05 | R02 | 1 | 0 | 756 |
Grae_F1 | R05 | R06 | 0 | 0 | 8079 |
Grae_F1 | R05 | R_106 | 0 | 0 | 7095 |
Grae_F1 | R06 | R_106 | 0 | 0 | 14,392 |
Grae_F1 | R05 | R01B | 0 | 0 | 3071 |
Grae_F1 | R06 | R01B | 0 | 0 | 10,974 |
Grae_F1 | R_106 | R01B | 0 | 0 | 9089 |
Grae_F1 | R05 | R08 | 0 | 0 | 6859 |
Grae_F1 | R06 | R08 | 0 | 0 | 17,917 |
Grae_F1 | R_106 | R08 | 0 | 0 | 13,881 |
Grae_F1 | R01B | R08 | 0 | 0 | 9717 |
Grae_F1 | R05 | R16 | 0 | 0 | 1976 |
Grae_F1 | R06 | R16 | 0 | 0 | 8781 |
Grae_F1 | R_106 | R16 | 0 | 0 | 7621 |
Grae_F1 | R01B | R16 | 0 | 0 | 3097 |
Grae_F1 | R08 | R16 | 0 | 0 | 7615 |
Grae_F1 | R05 | R035 | 0 | 0 | 6644 |
Grae_F1 | R06 | R035 | 0 | 0 | 17,294 |
Grae_F1 | R_106 | R035 | 0 | 0 | 13,331 |
Grae_F1 | R01B | R035 | 0 | 0 | 9541 |
Grae_F1 | R08 | R035 | 0 | 0 | 15,850 |
Grae_F1 | R16 | R035 | 0 | 0 | 7254 |
Grae_F1 | R05 | R032 | 0 | 0 | 4604 |
Grae_F1 | R06 | R032 | 0 | 0 | 13,673 |
Grae_F1 | R_106 | R032 | 0 | 0 | 14,823 |
Grae_F1 | R01B | R032 | 0 | 0 | 5660 |
Grae_F1 | R08 | R032 | 0 | 0 | 11,085 |
Grae_F1 | R16 | R032 | 0 | 0 | 4519 |
Grae_F1 | R035 | R032 | 0 | 0 | 11,750 |
Grae_F1 | R05 | R02 | 0 | 0 | 1834 |
Grae_F1 | R06 | R02 | 0 | 0 | 6470 |
Grae_F1 | R_106 | R02 | 0 | 0 | 5925 |
Grae_F1 | R01B | R02 | 0 | 0 | 2555 |
Grae_F1 | R08 | R02 | 0 | 0 | 5546 |
Grae_F1 | R16 | R02 | 0 | 0 | 1651 |
Grae_F1 | R035 | R02 | 0 | 0 | 5209 |
Grae_F1 | R032 | R02 | 0 | 0 | 4338 |
Grae_F1 | R05 | R109 | 0 | 0 | 5360 |
Grae_F1 | R06 | R109 | 0 | 0 | 16,734 |
Grae_F1 | R_106 | R109 | 0 | 0 | 13,094 |
Grae_F1 | R01B | R109 | 0 | 0 | 7735 |
Grae_F1 | R08 | R109 | 0 | 0 | 14,656 |
Grae_F1 | R16 | R109 | 0 | 0 | 5665 |
Grae_F1 | R035 | R109 | 0 | 0 | 14,385 |
Grae_F1 | R032 | R109 | 0 | 0 | 10,491 |
Grae_F1 | R02 | R109 | 0 | 0 | 4289 |
Grae_F1 | R05 | R200 | 0 | 0 | 2218 |
Grae_F1 | R06 | R200 | 0 | 0 | 7954 |
Grae_F1 | R_106 | R200 | 0 | 0 | 7059 |
Grae_F1 | R01B | R200 | 0 | 0 | 3174 |
Grae_F1 | R08 | R200 | 0 | 0 | 6968 |
Grae_F1 | R16 | R200 | 0 | 0 | 2264 |
Grae_F1 | R035 | R200 | 0 | 0 | 6544 |
Grae_F1 | R032 | R200 | 0 | 0 | 5044 |
Grae_F1 | R02 | R200 | 0 | 0 | 1789 |
Grae_F1 | R109 | R200 | 0 | 0 | 5462 |
Grae_F1 | R05 | R206 | 0 | 0 | 7308 |
Grae_F1 | R06 | R206 | 0 | 0 | 16,519 |
Grae_F1 | R_106 | R206 | 0 | 0 | 15,147 |
Grae_F1 | R01B | R206 | 0 | 0 | 10,088 |
Grae_F1 | R08 | R206 | 0 | 0 | 16,223 |
Grae_F1 | R16 | R206 | 0 | 0 | 8664 |
Grae_F1 | R035 | R206 | 0 | 0 | 16,124 |
Grae_F1 | R032 | R206 | 0 | 0 | 17,271 |
Grae_F1 | R02 | R206 | 0 | 0 | 6451 |
Grae_F1 | R109 | R206 | 0 | 0 | 15,931 |
Grae_F1 | R200 | R206 | 0 | 0 | 6771 |
Grae_P | R_106 | R206 | 0.0376 | 0 | 9702 |
Grae_P | R16 | R035 | 0.1342 | 0.03 | 1251 |
Grae_P | R06 | R032 | 0.1475 | 0.01 | 5310 |
Grae_P | R01B | R08 | 0.1899 | 0.02 | 2005 |
Grae_P | R035 | R109 | 0.2001 | 0.03 | 1914 |
Grae_P | R06 | R200 | 0.2039 | 0.02 | 4180 |
Grae_P | R035 | R206 | 0.2216 | 0.02 | 2351 |
Grae_P | R16 | R109 | 0.2638 | 0.03 | 1851 |
Grae_P | R05 | R_106 | 0.2796 | 0.02 | 6317 |
Grae_P | R032 | R206 | 0.2851 | 0.02 | 3558 |
Grae_P | R109 | R200 | 0.3176 | 0.03 | 2244 |
Grae_P | R16 | R032 | 0.4221 | 0.03 | 2202 |
Grae_P | R16 | R206 | 0.4297 | 0.03 | 2263 |
Grae_P | R_106 | R08 | 0.4779 | 0.01 | 9662 |
Grae_P | R06 | R02 | 0.4946 | 0.02 | 3639 |
Grae_P | R06 | R206 | 0.5241 | 0.02 | 5247 |
Grae_P | R06 | R_106 | 0.5294 | 0.01 | 12,108 |
Grae_P | R08 | R109 | 0.5426 | 0.03 | 3197 |
Grae_P | R06 | R035 | 0.5481 | 0.02 | 3677 |
Grae_P | R_106 | R032 | 0.5601 | 0.01 | 9643 |
Grae_P | R06 | R16 | 0.6021 | 0.02 | 3634 |
Grae_P | R08 | R032 | 0.7349 | 0.02 | 3524 |
Grae_P | R_106 | R16 | 0.8028 | 0.01 | 7310 |
Grae_P | R_106 | R200 | 0.8535 | 0.01 | 8054 |
Grae_P | R_106 | R109 | 0.9052 | 0.01 | 9174 |
Grae_P | R06 | R08 | 0.9312 | 0.01 | 5225 |
Grae_P | R05 | R06 | 1 | 0 | 2937 |
Grae_P | R05 | R01B | 1 | 0 | 851 |
Grae_P | R06 | R01B | 1 | 0 | 3286 |
Grae_P | R_106 | R01B | 1 | 0 | 6680 |
Grae_P | R05 | R08 | 1 | 0 | 1807 |
Grae_P | R05 | R16 | 1 | 0 | 982 |
Grae_P | R01B | R16 | 1 | 0 | 1144 |
Grae_P | R08 | R16 | 1 | 0 | 2209 |
Grae_P | R05 | R035 | 1 | 0 | 1050 |
Grae_P | R_106 | R035 | 1 | 0 | 7492 |
Grae_P | R01B | R035 | 1 | 0 | 1171 |
Grae_P | R08 | R035 | 1 | 0 | 2363 |
Grae_P | R05 | R032 | 1 | 0 | 1799 |
Grae_P | R01B | R032 | 1 | 0 | 1996 |
Grae_P | R035 | R032 | 1 | 0 | 2456 |
Grae_P | R05 | R02 | 1 | 0 | 1029 |
Grae_P | R_106 | R02 | 1 | 0 | 7367 |
Grae_P | R01B | R02 | 1 | 0 | 1146 |
Grae_P | R08 | R02 | 1 | 0 | 2312 |
Grae_P | R16 | R02 | 1 | 0 | 1358 |
Grae_P | R035 | R02 | 1 | 0 | 1382 |
Grae_P | R032 | R02 | 1 | 0 | 2280 |
Grae_P | R05 | R109 | 1 | 0 | 1483 |
Grae_P | R06 | R109 | 1 | 0 | 4692 |
Grae_P | R01B | R109 | 1 | 0 | 1718 |
Grae_P | R032 | R109 | 1 | 0 | 3199 |
Grae_P | R02 | R109 | 1 | 0 | 1942 |
Grae_P | R05 | R200 | 1 | 0 | 1138 |
Grae_P | R01B | R200 | 1 | 0 | 1441 |
Grae_P | R08 | R200 | 1 | 0 | 2586 |
Grae_P | R16 | R200 | 1 | 0 | 1586 |
Grae_P | R035 | R200 | 1 | 0 | 1587 |
Grae_P | R032 | R200 | 1 | 0 | 2708 |
Grae_P | R02 | R200 | 1 | 0 | 1562 |
Grae_P | R05 | R206 | 1 | 0 | 1805 |
Grae_P | R01B | R206 | 1 | 0 | 1989 |
Grae_P | R08 | R206 | 1 | 0 | 3542 |
Grae_P | R02 | R206 | 1 | 0 | 2328 |
Grae_P | R109 | R206 | 1 | 0 | 3185 |
Grae_P | R200 | R206 | 1 | 0 | 2622 |